Index

Symbols

--amiid neurocaas-contrib-remote-launch-devinstance command line option neurocaas-contrib-remote-update-blueprint command line option --analysis-name neurocaas-contrib command line option --bucket neurocaas-contrib-workflow-log-command command line option neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option --command neurocaas-contrib-workflow-log-command command line option neurocaas-contrib-workflow-log-command-local command line option --config neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-setup-inputs command line option neurocaas-contrib-remote-submit-job command line option --container neurocaas-contrib-local-enter-container command line option neurocaas-contrib-local-reset-container command line option neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-local-setup-development-container command line option --cutoff neurocaas-contrib-monitor-describe-datastatus command line option --data neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-setup-inputs command line option neurocaas-contrib-remote-submit-job command line option --dataname neurocaas-contrib-monitor-describe-datastatus command line option --default neurocaas-contrib-scripting-read-yaml command line option --display neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option neurocaas-contrib-workflow-put-result command line option --field neurocaas-contrib-scripting-read-yaml command line option --force neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-remote-end-session command line option neurocaas-contrib-remote-start-session command line option neurocaas-contrib-remote-terminate-devinstance command line option neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option --groupname neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datastatus command line option --hours neurocaas-contrib-monitor-describe-job-manager-request command line option --image neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-setup-development-container command line option --index neurocaas-contrib-monitor-describe-job-manager-request command line option neurocaas-contrib-remote-develop-remote command line option --instance neurocaas-contrib-remote-assign-instance command line option --jobind neurocaas-contrib-remote-job-output command line option neurocaas-contrib-remote-job-status command line option --key neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option --localpath neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option --location neurocaas-contrib command line option --locpath neurocaas-contrib-workflow-get-resultpath command line option --message neurocaas-contrib-remote-update-blueprint command line option --minutes neurocaas-contrib-remote-extend-lifetime command line option --name neurocaas-contrib-remote-create-devami command line option neurocaas-contrib-workflow-get-file command line option neurocaas-contrib-workflow-get-filename command line option neurocaas-contrib-workflow-get-filepath command line option neurocaas-contrib-workflow-register-file command line option --outpath neurocaas-contrib-scripting-parse-zip command line option --outputpath neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option --path neurocaas-contrib-monitor-visualize-parallelism command line option neurocaas-contrib-scripting-read-yaml command line option neurocaas-contrib-workflow-initialize-job command line option --resultfolder neurocaas-contrib-workflow-log-command command line option --resultpath neurocaas-contrib-workflow-put-result command line option --script neurocaas-contrib-local-save-developed-image command line option --stackname neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datasets command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-monitor-describe-job-manager-request command line option neurocaas-contrib-monitor-see-users command line option neurocaas-contrib-monitor-visualize-parallelism command line option --submitpath neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datasets command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-remote-submit-job command line option --tagid neurocaas-contrib-local-save-developed-image command line option

--timeout neurocaas-contrib-remote-launch-devinstance command line option neurocaas-contrib-remote-start-devinstance command line option --timestamp neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datastatus command line option --volumesize neurocaas-contrib-remote-launch-devinstance command line option --zippath neurocaas-contrib-scripting-parse-zip command line option -a neurocaas-contrib command line option neurocaas-contrib-remote-launch-devinstance command line option neurocaas-contrib-remote-update-blueprint command line option -b neurocaas-contrib-workflow-log-command command line option neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option -c neurocaas-contrib-local-enter-container command line option neurocaas-contrib-local-reset-container command line option neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-local-setup-development-container command line option neurocaas-contrib-local-setup-inputs command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-remote-submit-job command line option neurocaas-contrib-workflow-log-command command line option neurocaas-contrib-workflow-log-command-local command line option -d neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-setup-inputs command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-remote-submit-job command line option neurocaas-contrib-scripting-read-yaml command line option neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option neurocaas-contrib-workflow-put-result command line option -f neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-remote-end-session command line option neurocaas-contrib-remote-start-session command line option neurocaas-contrib-remote-terminate-devinstance command line option neurocaas-contrib-scripting-read-yaml command line option neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option -g neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datastatus command line option -h neurocaas-contrib-monitor-describe-job-manager-request command line option -i neurocaas-contrib-local-run-analysis command line option neurocaas-contrib-local-setup-development-container command line option neurocaas-contrib-monitor-describe-job-manager-request command line option neurocaas-contrib-remote-assign-instance command line option neurocaas-contrib-remote-develop-remote command line option -j neurocaas-contrib-remote-job-output command line option neurocaas-contrib-remote-job-status command line option -k neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option -l neurocaas-contrib-workflow-get-resultpath command line option neurocaas-contrib-workflow-register-config command line option neurocaas-contrib-workflow-register-dataset command line option neurocaas-contrib-workflow-register-file command line option neurocaas-contrib-workflow-register-resultpath command line option -m neurocaas-contrib-remote-extend-lifetime command line option neurocaas-contrib-remote-update-blueprint command line option -n neurocaas-contrib-monitor-visualize-parallelism command line option neurocaas-contrib-remote-create-devami command line option neurocaas-contrib-workflow-get-file command line option neurocaas-contrib-workflow-get-filename command line option neurocaas-contrib-workflow-get-filepath command line option neurocaas-contrib-workflow-register-file command line option -o neurocaas-contrib-scripting-parse-zip command line option neurocaas-contrib-workflow-get-config command line option neurocaas-contrib-workflow-get-data command line option neurocaas-contrib-workflow-get-file command line option -p neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datasets command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-monitor-visualize-parallelism command line option neurocaas-contrib-scripting-read-yaml command line option neurocaas-contrib-workflow-initialize-job command line option -r neurocaas-contrib-workflow-log-command command line option neurocaas-contrib-workflow-put-result command line option -s neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datasets command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-monitor-describe-job-manager-request command line option neurocaas-contrib-monitor-see-users command line option neurocaas-contrib-remote-submit-job command line option -t neurocaas-contrib-local-save-developed-image command line option neurocaas-contrib-monitor-describe-certificate command line option neurocaas-contrib-monitor-describe-datastatus command line option neurocaas-contrib-remote-launch-devinstance command line option neurocaas-contrib-remote-start-devinstance command line option -v neurocaas-contrib-remote-launch-devinstance command line option -z neurocaas-contrib-scripting-parse-zip command line option

A

active_container (neurocaas_contrib.blueprint.Blueprint property), [1] active_container_status (neurocaas_contrib.blueprint.Blueprint property), [1] active_image (neurocaas_contrib.blueprint.Blueprint property) add_conda_env() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] add_dlami() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1]

append_conda_path_command() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] assign_default_container() (neurocaas_contrib.local.NeuroCAASImage method), [1] assign_default_image() (neurocaas_contrib.local.NeuroCAASImage method), [1] assign_instance() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] assign_template() (neurocaas_contrib.log.NeuroCAASCertificate method), [1]

B

Blueprint (class in neurocaas_contrib.blueprint), [1]

build_default_image() (neurocaas_contrib.local.NeuroCAASImage method), [1]

C

calculate_parallelism() (in module neurocaas_contrib.monitor), [1] calculate_parallelism_nones() (in module neurocaas_contrib.monitor), [1] calculate_usage() (in module neurocaas_contrib.monitor), [1] change_owner() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] check_bucket_exists() (in module neurocaas_contrib.monitor) check_clear() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] check_conda_env() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] check_dirs() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] check_running() (neurocaas_contrib.remote.NeuroCAASAMI method), [1]

cleanup() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] config_io_path() (neurocaas_contrib.local.NeuroCAASEnv method) (neurocaas_contrib.local.NeuroCAASRemoteEnv method), [1] convert_folder_to_stackname() (in module neurocaas_contrib.cli_commands) create_ctx() (in module neurocaas_contrib.cli_commands) create_devami() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] create_test_dir() (in module neurocaas_contrib.cli_commands) create_volume() (neurocaas_contrib.local.NeuroCAASEnv method) (neurocaas_contrib.local.NeuroCAASLocalEnv method), [1] (neurocaas_contrib.local.NeuroCAASRemoteEnv method), [1]

D

delete_ami_from_cli() (in module neurocaas_contrib.cli_commands)

diff() (neurocaas_contrib.monitor.RangeFinder method), [1] download() (in module neurocaas_contrib.Interface_S3), [1]

E

exec_command() (neurocaas_contrib.connect.SSHConnection method), [1]

exists() (neurocaas_contrib.connect.FTPConnection method), [1] extend_lifetime() (neurocaas_contrib.remote.NeuroCAASAMI method), [1]

F

find_image() (neurocaas_contrib.local.NeuroCAASImage method), [1] find_linebreaks() (in module neurocaas_contrib.log), [1]

from_dict() (neurocaas_contrib.remote.NeuroCAASAMI class method), [1] from_registration() (neurocaas_contrib.scripting.NeuroCAASScriptManager class method), [1] FTPConnection (class in neurocaas_contrib.connect), [1]

G

get() (neurocaas_contrib.connect.FTPConnection method), [1] get_analysis_cost() (in module neurocaas_contrib.monitor), [1] get_bucket_name() (in module neurocaas_contrib.scripting), [1] (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_certificate() (neurocaas_contrib.monitor.JobMonitor method), [1] get_certificate_values() (neurocaas_contrib.monitor.JobMonitor method), [1] get_config() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_config_name() (in module neurocaas_contrib.scripting), [1] get_configname() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_configpath() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_data() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_dataname() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_dataname_remote() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_datapath() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_dataset_name() (in module neurocaas_contrib.scripting), [1] get_datasets() (neurocaas_contrib.monitor.JobMonitor method), [1] get_datastatus() (neurocaas_contrib.monitor.JobMonitor method), [1] get_datastatus_name() (in module neurocaas_contrib.scripting), [1] get_datastatus_values() (neurocaas_contrib.monitor.JobMonitor method), [1] get_default_image() (neurocaas_contrib.local.NeuroCAASImage method), [1] get_default_rawfile() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASDataStats method), [1] (neurocaas_contrib.log.NeuroCAASLogObject method), [1] get_duration() (in module neurocaas_contrib.monitor), [1] get_file() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1]

get_filename() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_filepath() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_group() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_group_name() (in module neurocaas_contrib.scripting), [1] get_inputs() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] get_instance_state() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] get_jobs() (in module neurocaas_contrib.monitor), [1] get_lambda_id() (neurocaas_contrib.monitor.JobMonitor method), [1] (neurocaas_contrib.monitor.LogMonitor method), [1] get_lifetime() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] get_logs() (neurocaas_contrib.monitor.LambdaMonitor method), [1] get_month() (in module neurocaas_contrib.monitor) get_name() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_path() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_resultpath() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_resultpath_tmp() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] get_status() (neurocaas_contrib.log.NeuroCAASDataStatus method), [1] (neurocaas_contrib.log.NeuroCAASDataStatusLegacy method), [1] get_stdout() (neurocaas_contrib.log.NeuroCAASDataStatus method), [1] (neurocaas_contrib.log.NeuroCAASDataStatusLegacy method), [1] get_usage() (neurocaas_contrib.log.NeuroCAASDataStatus method), [1] (neurocaas_contrib.log.NeuroCAASDataStatusLegacy method), [1] get_user_logs() (in module neurocaas_contrib.monitor), [1] get_users() (in module neurocaas_contrib.monitor), [1] get_yaml_field() (in module neurocaas_contrib.scripting), [1]

I

initialize_blueprint() (neurocaas_contrib.local.NeuroCAASDeveloperInterface method), [1]

initialize_writeobj() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] isdir() (neurocaas_contrib.connect.FTPConnection method), [1]

J

job_output() (neurocaas_contrib.remote.NeuroCAASAMI method), [1]

job_status() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] JobMonitor (class in neurocaas_contrib.monitor), [1]

L

LambdaMonitor (class in neurocaas_contrib.monitor), [1] launch_development_instance() (neurocaas_contrib.local.NeuroCAASDeveloperInterface method), [1] launch_devinstance() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] load() (neurocaas_contrib.log.NeuroCAASLogObject method), [1] load_blueprint() (neurocaas_contrib.local.NeuroCAASDeveloperInterface method), [1] load_file_s3() (in module neurocaas_contrib.log) load_init_s3() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASDataStats method), [1] (neurocaas_contrib.log.NeuroCAASLogObject method), [1]

load_json() (in module neurocaas_contrib.monitor), [1] load_reinit_local() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASDataStats method), [1] log_command() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] log_process() (in module neurocaas_contrib.scripting), [1] LogMonitor (class in neurocaas_contrib.monitor), [1] ls_name() (in module neurocaas_contrib.monitor), [1]

M

main() (in module neurocaas_contrib.main) mkdir() (neurocaas_contrib.connect.FTPConnection method), [1] mkdir_notexists() (in module neurocaas_contrib.scripting) (neurocaas_contrib.connect.FTPConnection method), [1] mkdir_r_notexists() (neurocaas_contrib.connect.FTPConnection method), [1] module neurocaas_contrib neurocaas_contrib.blueprint, [1] neurocaas_contrib.cli_commands neurocaas_contrib.connect, [1] neurocaas_contrib.docker_mats neurocaas_contrib.docker_mats.prod_env neurocaas_contrib.docker_mats.test_env neurocaas_contrib.Interface_S3, [1] neurocaas_contrib.local, [1] neurocaas_contrib.log, [1] neurocaas_contrib.main neurocaas_contrib.monitor, [1] neurocaas_contrib.remote, [1] neurocaas_contrib.scripting, [1] neurocaas_contrib.template_mats

N

neurocaas-contrib command line option --analysis-name --location -a neurocaas-contrib-local-enter-container command line option --container -c neurocaas-contrib-local-reset-container command line option --container -c neurocaas-contrib-local-run-analysis command line option --config --data --image -c -d -i neurocaas-contrib-local-save-developed-image command line option --container --force --script --tagid -c -f -s -t neurocaas-contrib-local-setup-development-container command line option --container --image -c -i neurocaas-contrib-local-setup-inputs command line option --config --data -c -d neurocaas-contrib-monitor-describe-certificate command line option --groupname --stackname --submitpath --timestamp -g -p -s -t neurocaas-contrib-monitor-describe-datasets command line option --stackname --submitpath -p -s neurocaas-contrib-monitor-describe-datastatus command line option --cutoff --dataname --groupname --stackname --submitpath --timestamp -c -d -g -p -s -t neurocaas-contrib-monitor-describe-job-manager-request command line option --hours --index --stackname -h -i -s neurocaas-contrib-monitor-see-users command line option --stackname -s neurocaas-contrib-monitor-visualize-parallelism command line option --path --stackname -n -p neurocaas-contrib-remote-assign-instance command line option --instance -i neurocaas-contrib-remote-create-devami command line option --name -n neurocaas-contrib-remote-develop-remote command line option --index -i neurocaas-contrib-remote-end-session command line option --force -f neurocaas-contrib-remote-extend-lifetime command line option --minutes -m neurocaas-contrib-remote-job-output command line option --jobind -j neurocaas-contrib-remote-job-status command line option --jobind -j neurocaas-contrib-remote-launch-devinstance command line option --amiid --timeout --volumesize -a -t -v neurocaas-contrib-remote-start-devinstance command line option --timeout -t neurocaas-contrib-remote-start-session command line option --force -f neurocaas-contrib-remote-submit-job command line option --config --data --submitpath -c -d -s neurocaas-contrib-remote-terminate-devinstance command line option --force -f neurocaas-contrib-remote-update-blueprint command line option --amiid --message -a -m neurocaas-contrib-scripting-parse-zip command line option --outpath --zippath -o -z

neurocaas-contrib-scripting-read-yaml command line option --default --field --path -d -f -p neurocaas-contrib-workflow-get-config command line option --display --force --outputpath -d -f -o neurocaas-contrib-workflow-get-data command line option --display --force --outputpath -d -f -o neurocaas-contrib-workflow-get-file command line option --display --force --name --outputpath -d -f -n -o neurocaas-contrib-workflow-get-filename command line option --name -n neurocaas-contrib-workflow-get-filepath command line option --name -n neurocaas-contrib-workflow-get-resultpath command line option --locpath -l neurocaas-contrib-workflow-initialize-job command line option --path -p neurocaas-contrib-workflow-log-command command line option --bucket --command --resultfolder -b -c -r neurocaas-contrib-workflow-log-command-local command line option --command -c neurocaas-contrib-workflow-put-result command line option --display --resultpath -d -r neurocaas-contrib-workflow-register-config command line option --bucket --key --localpath -b -k -l neurocaas-contrib-workflow-register-dataset command line option --bucket --key --localpath -b -k -l neurocaas-contrib-workflow-register-file command line option --bucket --key --localpath --name -b -k -l -n neurocaas-contrib-workflow-register-resultpath command line option --bucket --key --localpath -b -k -l neurocaas_contrib module neurocaas_contrib.blueprint module, [1] neurocaas_contrib.cli_commands module neurocaas_contrib.connect module, [1] neurocaas_contrib.docker_mats module neurocaas_contrib.docker_mats.prod_env module neurocaas_contrib.docker_mats.test_env module neurocaas_contrib.Interface_S3 module, [1] neurocaas_contrib.local module, [1] neurocaas_contrib.log module, [1] neurocaas_contrib.main module neurocaas_contrib.monitor module, [1] neurocaas_contrib.remote module, [1] neurocaas_contrib.scripting module, [1] neurocaas_contrib.template_mats module NeuroCAASActivityLog (class in neurocaas_contrib.log), [1] NeuroCAASAMI (class in neurocaas_contrib.remote), [1] NeuroCAASAutoScript (class in neurocaas_contrib.local), [1] NeuroCAASCertificate (class in neurocaas_contrib.log), [1] NeuroCAASDataStats (class in neurocaas_contrib.log), [1] NeuroCAASDataStatus (class in neurocaas_contrib.log), [1] NeuroCAASDataStatusLegacy (class in neurocaas_contrib.log), [1] NeuroCAASDeveloperInterface (class in neurocaas_contrib.local), [1] NeuroCAASEnv (class in neurocaas_contrib.local) NeuroCAASImage (class in neurocaas_contrib.local), [1] NeuroCAASLocalEnv (class in neurocaas_contrib.local), [1] NeuroCAASLogObject (class in neurocaas_contrib.log), [1] NeuroCAASRemoteEnv (class in neurocaas_contrib.local), [1] NeuroCAASScriptManager (class in neurocaas_contrib.scripting), [1]

P

parse_response() (neurocaas_contrib.monitor.LambdaMonitor method), [1] parse_zipfile() (in module neurocaas_contrib.scripting), [1] postprocess_jobdict() (in module neurocaas_contrib.monitor), [1] print_log() (neurocaas_contrib.monitor.LambdaMonitor method), [1] process_rawcert() (neurocaas_contrib.log.NeuroCAASCertificate method), [1]

ProgressPercentage_d (class in neurocaas_contrib.Interface_S3), [1] ProgressPercentage_u (class in neurocaas_contrib.Interface_S3), [1] put() (neurocaas_contrib.connect.FTPConnection method), [1] (neurocaas_contrib.log.WriteObj method), [1] put_json() (neurocaas_contrib.log.WriteObj method), [1] put_result() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1]

R

r_get() (neurocaas_contrib.connect.FTPConnection method), [1] r_put() (neurocaas_contrib.connect.FTPConnection method), [1] range_months() (neurocaas_contrib.monitor.RangeFinder method) RangeFinder (class in neurocaas_contrib.monitor), [1] register_config() (in module neurocaas_contrib.scripting), [1] (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_config_local() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_data() (in module neurocaas_contrib.scripting), [1] (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_data_local() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_file() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_file_local() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1]

register_resultpath() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_resultpath_local() (neurocaas_contrib.scripting.NeuroCAASScriptManager method), [1] register_submit() (neurocaas_contrib.monitor.JobMonitor method), [1] reload() (neurocaas_contrib.blueprint.Blueprint method), [1] (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASLogObject method), [1] return_range() (neurocaas_contrib.monitor.RangeFinder method) return_tags() (in module neurocaas_contrib.remote), [1] rm() (neurocaas_contrib.connect.FTPConnection method), [1] run_analysis() (neurocaas_contrib.local.NeuroCAASImage method), [1] run_analysis_parametrized() (neurocaas_contrib.local.NeuroCAASImage method), [1] run_analysis_workflow() (neurocaas_contrib.local.NeuroCAASImage method), [1]

S

save_ami_to_cli() (in module neurocaas_contrib.cli_commands) save_container_to_image() (neurocaas_contrib.local.NeuroCAASImage method), [1] save_container_to_image_workflow() (neurocaas_contrib.local.NeuroCAASImage method), [1] set_important_options() (in module neurocaas_contrib.cli_commands) setup_client() (neurocaas_contrib.local.NeuroCAASRemoteEnv method), [1] setup_container() (neurocaas_contrib.local.NeuroCAASImage method), [1] sort_activity_by_users() (in module neurocaas_contrib.monitor), [1] splitall() (in module neurocaas_contrib.connect), [1]

SSH (class in neurocaas_contrib.connect) SSHConnection (class in neurocaas_contrib.connect), [1] start_devinstance() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] stop_devinstance() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] submit_job() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] sync_get() (neurocaas_contrib.local.NeuroCAASLocalEnv method) (neurocaas_contrib.local.NeuroCAASRemoteEnv method), [1] sync_put() (neurocaas_contrib.local.NeuroCAASLocalEnv method) (neurocaas_contrib.local.NeuroCAASRemoteEnv method), [1]

T

terminate_devinstance() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] test_container() (neurocaas_contrib.local.NeuroCAASImage method), [1]

to_dict() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] track_job() (neurocaas_contrib.local.NeuroCAASImage method), [1]

U

update() (neurocaas_contrib.monitor.RangeFinder method), [1] update_blueprint() (neurocaas_contrib.remote.NeuroCAASAMI method), [1] update_container_history() (neurocaas_contrib.blueprint.Blueprint method), [1] update_develop_history() (neurocaas_contrib.blueprint.Blueprint method), [1] update_file() (neurocaas_contrib.log.NeuroCAASDataStatus method), [1] (neurocaas_contrib.log.NeuroCAASDataStatusLegacy method), [1]

update_image_history() (neurocaas_contrib.blueprint.Blueprint method), [1] update_instance_info() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] update_results() (neurocaas_contrib.local.NeuroCAASLocalEnv method) upload() (in module neurocaas_contrib.Interface_S3), [1]

V

validate_path() (neurocaas_contrib.log.NeuroCAASLogObject method), [1]

W

write() (neurocaas_contrib.blueprint.Blueprint method), [1] (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASDataStats method), [1] (neurocaas_contrib.scripting.NeuroCAASScriptManager method)

write_local() (neurocaas_contrib.log.NeuroCAASCertificate method), [1] (neurocaas_contrib.log.NeuroCAASDataStats method), [1] write_new_script() (neurocaas_contrib.local.NeuroCAASAutoScript method), [1] WriteObj (class in neurocaas_contrib.log), [1]